The Protocol

Dossier · the reference protocol

The Reference Protocol

Somewhere in the world one man has spent roughly two million dollars a year turning himself into a measured system: a published, versioned protocol with about a hundred moving parts, quarterly blood panels, annual whole-body MRI, continuous glucose monitoring and daily body composition. Whatever you think of the project, it is the closest thing the field has to a fully-specified hypothesis you can audit line by line. This is that audit — with the actual biochemistry under each lever, the doses as published, what has been quietly removed, and where the strongest independent researchers say it overreaches.

Research vintage · Q3 2026

Before anything else

How to read a protocol like this

The value is in the structure and the instrumentation, not the shopping list.

Limited human dataCompany-sourced

What it is, and what it cannot be

The measurement discipline is the part worth stealing: blood panels every 3–6 months, annual whole-body MRI, annual skin and eye checks, dental every six months, continuous glucose monitoring, daily weight, body fat, muscle mass, hydration and arterial stiffness, multispectral skin imaging, and a protocol that changes when the numbers say it should rather than when a podcast does.

The structural limit, stated plainly

With ~100 simultaneous interventions and one subject, nothing in it is attributable. If a marker improves you cannot say which lever moved it, whether it was regression to the mean, or whether a man who sleeps eight hours on a fixed schedule, trains daily, eats 2,250 clean calories and drinks no alcohol would post those numbers with none of the supplements at all. This is not a nitpick — it is the entire epistemic ceiling of the project, and the person running it acknowledges it.

Roughly 90% of the plausible effect comes from the boring 10%: sleep regularity, daily training, whole-food plant-forward eating at a modest calorie level, zero alcohol, and relentless measurement. The exotic remainder absorbs nearly all the cost, all the risk, and all the attention.

Age gates a large fraction of this

Much of this protocol is designed for a metabolically-aging 47-year-old and is either useless or actively harmful in a body still finishing development. Growth-hormone-axis work, GLP-1 agonists, mTOR inhibition, testosterone-adjacent intervention and aggressive caloric restriction all sit in that category. Under ~25, the correct version of this protocol is the boring 10% executed ruthlessly, and nothing else.

The stack

Supplements — full doses, grouped by evidence

A dose without a number is not information. These are the published amounts, sorted by how good the evidence actually is.

RCT / meta-analysisPrimary literature

Tier 1 — take these, they are boring and they work

CompoundDoseTimingWhy
Creatine monohydrate5 g/day (no loading needed; loading 20 g/day × 5–7 days only saturates faster)Any time; consistency beats timingPhosphocreatine regenerates ATP from ADP faster than glycolysis can — a buffer that flattens the ATP trough in the first ~10s of maximal effort
EPA + DHA2–3 g combined EPA+DHA (read the label — a '1000 mg fish oil' capsule is often only ~300 mg EPA+DHA). This is a pharmacological rather than nutritional dose — at ≥3 g/day, bleeding time and atrial-fibrillation signals become relevantWith a fat-containing mealIncorporates into membrane phospholipids, displaces arachidonic acid from COX/LOX, and yields resolvins that actively terminate inflammation
Vitamin D31,000–4,000 IU/day, titrated to a measured 25(OH)D of 30–50 ng/mL. Do not take blindWith fatHydroxylated to calcitriol, a true steroid hormone binding the nuclear VDR/RXR heterodimer
Vitamin K2 (MK-7)100–200 mcg/dayWith D3γ-carboxylates matrix Gla protein, which inhibits vascular calcification — the mechanistic reason to pair it with D3
Magnesium glycinate200–350 mg elemental — 350 mg/day is the Tolerable Upper Intake Level for *supplemental* magnesium (adults and 14+)EveningCofactor for 300+ enzymes including every ATP-dependent reaction (ATP is biologically active as Mg-ATP); glycinate form for absorption without the osmotic laxative effect of oxide
Dietary fibre (prebiotic)Inulin ~5 g, GOS ~2 g, arabinogalactan ~5 g — build up slowly or the fermentation is unpleasantMorningFermented to butyrate (colonocyte fuel and an HDAC inhibitor) and propionate (suppresses hepatic gluconeogenesis)
Protein1.6–2.2 g/kg bodyweight daily; 0.4 g/kg per feeding, ≥2.5 g leucine per feedingSpread across 3–5 feedingsLeucine binds Sestrin2, releasing GATOR2 inhibition so Rag GTPases recruit mTORC1 to the lysosome
If everything below this table were deleted, the protocol would lose very little defensible value and most of its cost.
Mechanism · animal onlyPrimary literature

Tier 2 — real mechanism, thin outcome data

CompoundPublished doseMechanismThe honest read
Collagen peptides~11 g, twice dailyHydrolysed to prolyl-hydroxyproline, which survives digestion and appears in plasma, acting as a signalling ligand on fibroblasts to upregulate procollagenNot 'eaten collagen becomes skin collagen'. Skin-elasticity RCTs are positive but small, short, and overwhelmingly industry-funded
Urolithin A500–1,000 mg/dayInduces mitophagy via PINK1/Parkin: PINK1 accumulates on depolarised mitochondria, recruits Parkin, which ubiquitinates outer-membrane proteins to tag the organelle for engulfmentThe strongest tier-2 item. 2025 Nature Aging RCT (N=50, 1,000 mg/day, 4 weeks) confirmed mitophagy activation within 48h plus expanded naive-like CD8+ T cells and NK subsets
CoQ10 / ubiquinol100–200 mg/dayMobile lipid electron carrier from Complexes I/II to III; chain-breaking antioxidant in reduced formLoad-bearing biochemistry. Benefit in healthy non-statin users is far weaker than the mechanism suggests. Depleted by statins (shared mevalonate pathway)
Glycine + NAC (GlyNAC)Glycine ~100 mg/kg, NAC ~100 mg/kg — roughly 7 g of each daily at 70 kg, several times a typical OTC dose. These are trial-protocol amounts, not a supplement servingSupplies the two rate-limiting substrates for glutathione synthesis, which aging depletesConsistent pilot signal that partially reverses on washout (supports causality) — but n≈8–24 per arm from essentially one lab
Ashwagandha300–600 mg standardised extractWithanolides blunt HPA-axis output; cortisol reduction is the most replicated finding. Several European regulators advise against use under 18Real but modest. Documented hepatotoxicity case reports, and a genuine thyroid-axis modulator — a real interaction if thyroid hormone is also in the stack
NR / NMN250–500 mg/day, paired with TMG ~500 mgNAD+ precursors via the salvage and Preiss-Handler pathwaysA Jan 2026 Nature Metabolism RCT (N=65) confirmed both roughly double circulating NAD+ over 14 days — and measured no functional endpoint. Bioavailability is settled; benefit is not. TMG buffers the methyl groups consumed when excess nicotinamide is methylated for excretion

NAD+ precursors remain the most oversold category in the entire longevity market relative to outcome data. Bioavailability studies get cited as though they were efficacy studies. They are not.

Refuted / reversedPrimary literature

Tier 0 — the reversals

The most valuable output of any tracked protocol is a retraction.

Mechanism

Taurine — the founding premise is dead

The 2023 Science paper reporting that taurine declines with age and that supplementation extends healthspan in mice and monkeys drove enormous uptake at doses up to 14 g/day. It has since been undercut hard: a 2025 Aging Cell paper plus an NIH/NIA follow-up using the Baltimore Longitudinal Study of Aging, rhesus monkeys and mice found circulating taurine stayed flat or *increased* with age across all three — the opposite of the premise — with within-individual variation dwarfing any age trend. The original lead author is now on record saying he cannot recommend supplementation.

Mechanism

Spermidine — beautiful mechanism, null flagship trial

Deoxyhypusine synthase transfers spermidine's aminobutyl group onto a specific lysine of eIF5A, creating hypusine — the only protein modification of its kind in human biology — enabling translation of proline-rich mRNAs including autophagy transcription factors like TFEB. Genuinely elegant. And the flagship human trial for its most-marketed benefit (SmartAge, GeroScience, N=100, 12 months, cognition) was null on its primary endpoint, with a bioavailability study finding 40 mg/day barely moved circulating polyamines — far above what commercial wheat-germ products deliver.

A mechanism you can draw on a whiteboard is not evidence. Both of these had gorgeous molecular stories and failed at the endpoint that mattered. This is the single most useful lesson on this page.

Physician-only

The prescription column

Documented as published, behind a hard gate. These are one supervised adult's numbers, not a protocol.

ContestedPrimary literature

What is in it, at what dose, and why

Read this before the table

Every item below is a prescription drug used off-label, requiring baseline and periodic labs and a physician who knows it is being taken. The failure modes are not theoretical: pancreatic beta-cell toxicity, immune suppression, lactic acidosis, hypotension, thyroid dysregulation, euglycaemic ketoacidosis. The doses are reproduced as documentation of a published protocol — they are not a starting point, they are not age-appropriate for anyone still developing, and none of this should be sourced without a prescription.

DrugPublished doseMechanismEvidence status
Acarbose200 mg × 2 daily — note this exceeds the FDA-labelled maximum of 300 mg/dayCompetitively inhibits brush-border α-glucosidases, so starch reaches the colon undigested — blunted postprandial glucose and insulin, plus a microbiome-mediated component proven by faecal transferOne of the most reproducible NIA ITP hits (~20% median lifespan extension, male mice). Zero human longevity trials. GI effects are common and dose-limiting
Metformin500 mg, cycled ~6 weeks on/offMild Complex I inhibition raises AMP:ATP, activating AMPK via LKB1 → mTORC1 inhibition, ULK1 phosphorylation (autophagy), PGC-1α upregulationThe reason it is cycled: a 2025 JCEM RCT (N=72) found it *blunted* exercise-induced gains in vascular insulin sensitivity and aerobic capacity, by suppressing the same mitohormetic ROS signal that drives PGC-1α
Empagliflozin10 mg dailyBlocks proximal-tubule SGLT2, forcing urinary glucose excretion and a mild ketogenic, CR-mimicking stateRobust cardiovascular/renal outcome data in diabetics; essentially zero human senescence data. The largest mechanism-to-outcome gap in the protocol
Candesartan8 mg dailyAT1 receptor blockade preventing angiotensin II-driven vasoconstriction, aldosterone release and vascular smooth-muscle hypertrophyUsed to push BP below normal on the premise that arterial damage is cumulative. Mechanistically defensible, unstudied as a longevity intervention in normotensives
Evolocumab140 mg every 2 weeksPCSK9 antibody. PCSK9 normally marks hepatic LDL receptors for lysosomal degradation; blocking it lets receptors recycle, dramatically increasing LDL clearanceThe strongest evidence base of anything in this column — hard cardiovascular outcome trials. Premise (atherosclerosis is ApoB-particle-dose-over-time) is well supported
Thyroid (Armour + levothyroxine)60 mg + 100 mcgNuclear thyroid receptor transcription setting basal metabolic rate, mitochondrial biogenesis, β-adrenergic receptor densityInternally contested — and a full replacement-level combined dose given to an intact thyroid axis, which suppresses endogenous TSH and endogenous production. The longevity literature also points the other way — lower thyroid axis activity associates with longer life in several models and in human centenarian cohorts
Tadalafil5 mg dailyPDE5 inhibition preserves cGMP, keeping protein kinase G active and vascular smooth muscle relaxedGenuine interest in chronic low-dose use for endothelial function; the neuroprotection signal is observational only. Nothing here supports use by a young person with normal endothelial function, and grey-market sourcing of PDE5 inhibitors is common and unsafe
Oral minoxidil3.75 mg dailySee the mechanism ledger — mechanism honestly incompletely understoodFormal modified-Delphi consensus (JAMA Dermatology, late 2024) plus JAAD safety recommendations (2025). Expert-consensus tier: below large RCTs, above marketing. Counterweight, because this is the row most likely to tempt a young reader — systemic minoxidil causes dose-dependent hypertrichosis of face and body (the usual reason people stop), fluid retention, tachycardia and postural hypotension, and warrants cardiovascular screening before starting
ContestedResearcher, own field

Rapamycin — the removal that taught the most

Five years in, he quit. The field's leading rapamycin researcher did not.

Mechanism

The mechanism, precisely

Rapamycin binds the cytosolic immunophilin FKBP12; that complex binds the FRB domain of mTOR, allosterically inhibiting mTORC1. Active mTORC1 phosphorylates ULK1 at Ser757, blocking the ULK1–Atg13–FIP200 complex from initiating autophagy — so inhibiting mTORC1 releases that brake while simultaneously cutting translational and ribosome-biogenesis load via S6K1 and 4E-BP1. Less anabolic load, more damage clearance: that is the whole geroprotective thesis.

He stopped around late September 2025 after roughly five years. His stated reasons: lipid abnormalities, worsening glucose and insulin resistance, elevated resting heart rate, and recurrent soft-tissue infections that dose adjustment did not resolve — plus literature concern about beta-cell toxicity and NK-cell inhibition (a cancer-surveillance risk), reinforced by a preprint reporting accelerated aging across 16 epigenetic clocks. His framing: the maths changed for a healthy 46-year-old versus an aging mouse.

The interesting part is that this inverts the usual story. Matt Kaeberlein — among the most credible primary rapamycin researchers alive — is if anything *more* bullish than the self-experimenter now is, maintaining it remains the most robust and translationally viable geroprotective molecule of the last fifteen years, citing ITP data — the 2009 Harrison arm starting at 600 days produced roughly 9% (males) and 14% (females) median extension, with the larger ~30% figures coming from later, earlier-started, higher-dose arms. The best human RCT (PEARL, N=114, 48 weeks, 5–10 mg weekly) was null on its primary outcome of visceral fat, with real but modest secondary signal on lean mass in women and self-reported wellbeing.

A famous self-experimenter quitting a drug is an n=1 tolerance report, not a verdict on the molecule — and the leading domain expert reading the same literature reached the opposite conclusion. Hold both facts at once. This is the cleanest available lesson in why protocol changes by public figures should never be mistaken for scientific findings.

Devices & interventions

Therapies, with protocols

The recurring column

InterventionProtocolMechanismEvidence
Sauna~80°C, 20 min dailyHSF1 trimerises and transcribes HSP70/HSP90 to refold denatured proteins; thermoregulatory cardiac output plus repeated endothelial shear stress upregulates eNOS; plasma volume expandsStrong observational — Finnish cohorts show dose-dependent mortality reduction at 4–7 sessions/week versus 1. Best evidence-to-cost ratio on this table
Red / near-infrared light660 nm + 850 nm, 6 min morning and eveningPhotons absorbed by cytochrome c oxidase (Complex IV), photodissociating inhibitory nitric oxide from its binuclear centre and transiently raising electron transport and ATP outputReal chromophore, real absorption spectrum, inconsistent clinical endpoints and wildly non-standardised device parameters
Acoustic shockwave4,500 pulses, 3× weeklyMechanical pressure waves induce microtrauma triggering VEGF-mediated neovascularisation and mesenchymal progenitor recruitmentDecent in tendinopathy; the vascular/longevity framing is extrapolation
Hyperbaric oxygen90-min sessions, ~60 over 3 monthsThe hyperoxic-hypoxic paradox: elevated dissolved plasma O₂ then return to normoxia stabilises HIF-1α as though hypoxic, driving angiogenesisOne small non-randomised Israeli trial (telomere elongation, senescent-cell clearance in PBMCs) is the headline. Not replicated
Tretinoin0.025–0.1% nightlyRAR/RXR heterodimer releases corepressors and recruits coactivators — raising procollagen transcription while directly inhibiting AP-1, the factor UV activatesDecades of biopsy-confirmed RCT data. The single best-evidenced item in the entire aesthetic column
Oral careWater flosser, floss, electric brush, tongue scraper — twice dailyPeriodontal pathogens (notably P. gingivalis) drive chronic systemic inflammatory load; gingival bacteraemia is a plausible causal route into cardiovascular and neurodegenerative riskGenuinely underrated, essentially free, real epidemiology

The two items with the best evidence-to-cost ratio are the two nobody posts about: sauna and dental hygiene.

SpeculativeCompany-sourced

The experimental column

Where the protocol is genuinely out past the evidence.

Follistatin gene therapy (2023)
An AAV-delivered construct expressing follistatin, which binds and neutralises myostatin. Myostatin normally signals through activin type II receptors to activate Smad2/3, repressing muscle protein synthesis; removing that brake increases mass, as seen in myostatin-null cattle and rare human loss-of-function cases. Performed outside the US regulatory system. Gene therapy is not reversible, and durability, off-target expression and long-term immune consequences of AAV in a healthy adult are unknown.
Mesenchymal stem cells (~300 million, 2024)
Injected into knees, hips and shoulders. Current understanding is that MSCs do not meaningfully engraft or differentiate — they act paracrine, secreting extracellular vesicles and immunomodulatory factors that shift local macrophages toward an anti-inflammatory phenotype. Effects are therefore transient. Largely unregulated as an industry, with real variance in what is actually in the vial.
Plasma exchange
The multi-generational young-plasma transfer was publicly run and then abandoned. What has since accumulated real evidence is *dilution* rather than young-factor addition: a Buck Institute trial (Aging Cell, May 2025) found biweekly TPE + IVIG produced an average 2.61-year reduction in epigenetic age, TPE alone 1.32 years, front-loaded with diminishing returns. Diluting accumulated pro-aging plasma factors appears sufficient — a far more defensible claim than the parabiosis hype cycle, because it requires no magic molecule, only removal.
Cerebrolysin — a publicly reported null
A porcine-brain-derived peptide preparation given intramuscularly for three months. No measurable effect; discontinued. Worth flagging precisely because it is a clean negative result publicly reported — the scarcest artifact in this entire space, and the single strongest evidence that the protocol is run honestly.
Aesthetic device stack
1927 nm and 1550 nm fractional lasers, microfocused ultrasound and RF microneedling, each roughly every six months. All share one mechanism: controlled thermal injury at a dermal depth that spares the epidermis, triggering fibroblast activation, neocollagenesis and matrix remodelling. Real, well-characterised, genuinely effective — and the most expensive line item.

Gene therapy, stem-cell injection and plasma exchange outside a regulated clinical setting are where self-experimentation stops being reversible. No dosing, sourcing or how-to information appears here and none should be sought. Fight Aging! — a publication broadly sympathetic to aggressive self-experimentation — has explicitly warned that unregulated peptide and gene-therapy marketing is blurring the line with approved medicine. That warning is worth more than the enthusiasm around it.

The method underneath

How to audit any protocol

The reusable part of this dossier. Everything above is one protocol; this is the filter that produced the reading of it.

Primary literature

The source filter

Rank by whose claims can be trusted and for what — never by reach.

Auditing a protocol is mostly a sourcing problem. Almost nothing in this space is fabricated; it is real research stripped of its effect size, its confidence interval and its limitations by someone whose income depends on it sounding certain. Two questions have to be asked separately, and merging them is the single most common failure: how good is the evidence, and who is telling me and what do they want. A company-sourced claim about a well-designed RCT and a researcher-sourced claim about mouse data are different problems.

TierWhat it isWhat it can support
1 · PrimaryPeer-reviewed literature, preregistered trials, regulatory filingsAnything, within its stated limits
2 · ResearcherA working scientist publishing in this specific fieldMechanism and interpretation
3 · Researcher-practitionerWorks from primary literature, publishes their own analysis, engages rather than cites decorativelySynthesis, and the why. The target tier
4 · OperatorVerifiable, numbers-backed record over long enough to include a bad yearWhat works in practice. Never a mechanism claim
5 · Press / companyJournalism, aggregators, or anyone with a commercial interestThat an event occurred
6 · SurfaceContent marketing, SEO farms, course funnelsNothing
The canonical calibration: asked about hypertrophy, the right answer is Chris Beardsley — not the largest science-based channel. If the output looks like a list of the biggest names in a space, the filter did not run.
  • Cites without engaging — a study named, its effect size never given. The most common failure, and the hardest to spot, because it looks exactly like rigour.
  • Sells the certainty — confidence outruns the literature, and something is for sale at the end that the confidence was manufacturing demand for.
  • Drifts outside their field — expertise does not transfer.
  • Never publicly changes their mind — a spotless record in a live field means not paying attention.
  • Claims operator status without disclosed, dated numbers.
  • Only ever agrees with their own audience — audience capture is indistinguishable from expertise from the inside.
The correction that keeps it honest

A filter that penalises popularity will eventually hand back a contrarian answer, because contrarian answers feel like the product of rigorous filtering. That is the same error as credulity in better clothes. So: well-known is not the same as weak. If the strongest evidence points at sleep, sunscreen, protein, index funds or flossing, say so plainly and explain the mechanism. Depth means digging past the first answer, not rejecting it for being first.

And name the gaps

Sometimes the honest output is that no trustworthy communicator exists. Consumer skincare is the standing example — there is no source that reliably avoids blending real citations with product marketing, and the correct answer is to say so and point at the primary literature rather than nominate the least-bad option. A filter that always returns a name will eventually return a bad one.

Applied to the protocol above, the filter is what separates the four researcher-tier critiques that land from the far larger volume of commentary that does not — and what puts the branded supplement blends at company tier however good the underlying biochemistry looks.

Source tier — Written up in full at /articles/finding-the-real-experts, and installed locally as a Claude skill so it runs automatically on any source-credibility question.

The other side

What credible researchers say is wrong with it

From named scientists writing in their own fields, not from commentators.

ContestedResearcher, own field

The four criticisms that land

Morgan Levine — the headline number is a unit error
Levine, a leading epigenetic-clock researcher, has explicitly criticised the '31 years of aging reversed' framing. It derives from a DunedinPACE score of 0.66 multiplied against chronological age — but DunedinPACE measures a *rate* of aging at a point in time, not a quantity of years you can integrate backwards across a lifespan. The arithmetic simply does not work. She grants the lower epigenetic age probably does reflect genuinely lower disease and mortality risk; the specific number is unsupported.
Nir Barzilai — biological plausibility is not clinical evidence
The TAME trial PI's position: science is not done on n=1. A protocol with a hundred simultaneous variables and one subject cannot generate attributable knowledge, however well instrumented it is.
Andrew Steele — nothing has been proven yet
No intervention has been clinically proven to extend human life by targeting aging itself. Every geroprotective claim rests on animal lifespan data, human biomarker surrogates, or epidemiology — never a human longevity endpoint, because no such trial has finished.
Matt Kaeberlein — signal versus noise
Individual biomarker fluctuations in one person, measured frequently, generate apparent trends indistinguishable from noise without a control. Dense measurement makes this worse, not better, unless the analysis explicitly accounts for it.

Set against that: the criticisms are almost entirely about *inference*, not harm. Nobody credible argues that sleeping eight hours on a fixed schedule, training six hours a week, eating whole food, drinking no alcohol and measuring everything is bad for you. The argument is about what can be concluded — and whether the exotic 10% justifies its cost and risk.

Read it as a very expensive, very well-instrumented demonstration that the basics work, with an unattributable experiment stapled on top. Take the measurement discipline, the sleep regularity, the training floor, the food quality and the flossing. Leave the gene therapy.

Research notes, not medical or financial advice. Every prescription or experimental item named here is named with its mechanism and its risk and without a dose, on purpose — several require physician supervision, several are unregulated, and several are inappropriate for a body that is still developing. Start from your own bloodwork and a doctor, never from someone else’s regimen.

Non invenitur. Fit.